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Noncovalent Interactions in Fullerene-like Derivatives: Endohedral Confinement of Noble Gas Atoms Pnicogen Bonds Noncovalent Interactions in Fullerene-like Derivatives: Endohedral Confinement of Noble Gas Atoms Pnicogen Bonds

تعداد82 صفحه در فایل word

  1. Sc. Thesis in

Physical Chemistry

Noncovalent Interactions in Fullerene-like Derivatives:

  1. Endohedral Confinement of Noble Gas Atoms

  2. Pnicogen Bonds

Noncovalent Interactions in Fullerene-like Derivatives:

  1. Endohedral Confinement of Noble Gas Atoms

  2. Pnicogen Bonds

In the first part of present thesis, the encapsulation of noble gas atoms, Ng=He-Xe, in the stable heterofullerene structures X12Y12 (X=B, Al and Y=N, P) , Ng@ X12Y12 is studied. The calculated binding energies for all Ng@X12Y12 complexes are positive which indicates repulsive interaction between the two species. In the second part, stability, geometry and electronic structure of the C30X15Y15 (X=B, Al and Y=N, P) nanocages are compared. Formation energies and HOMO-LUMO gaps for series of XY-substituted C60 fullerenes have been systematically investigated via M05-2X functional combined with the 6–31G basis set. The results show that the larger band gaps and formation energies relate to nitrogen containing cages, C30B15N15 and C30Al15N15. The endohedral complexes of HnYF3-n, (Y=N, P and n=1, 2) with C30B15N15 and C30Al15N15 have been computationally characterized. The binding energies, equilibrium geometries and harmonic vibrational frequencies of these complexes have been calculated. It was found that all guest molecules are stabilized inside the nanocages and the geometries are not perturbed significantly upon encapsulation. The nature of the pnicogen interactions, N···N and P···N, and the charge transfer from the guest molecules to cages have been studied by using the quantum theory of atoms in molecules and natural bond orbital analyses.

Keyword: Heterofullerene, Noble gas atom, pnicogen interaction

Content

 

page

Chapter (Introduction)

1

1.1

Fullerenes

2

1.1.1

Heterofullerenes

2

1.2

Intermolecular Forces

4

1.2.1

Hydrogen Bonding

5

1.2.2

Halogen Bonding and σ-hole Concept

6

1.2.3

Pnicogen and Chalcogen Bonding

7

1.3

Objective of the Present Research

8

Chapter 2 (Literature Review)

9

2.1

Adsorption on the Surface of Fullerene-like Structures

10

2.2

Encapsulation

10

2.3

Intermolecular Interaction in the Form of Pnicogen Bonding

12

Chapter 3 (Theoretical Background)

14

3.1

Density Functional Theory (DFT)

15

3.2

Exchange-Correlation Functionals

15

3.2.1

Local Density Approximation

16

3.2.2

Generalized Gradient Approximation

16

3.2.3

Meta GGA Functionals

17

3.2.4

Hybrid GGA Functionals

17

3.2.5

Meta Hybrid GGA Functionals

17

3.3

Effective Core Potential Basis Sets

18

3.4

Basis Set Superposition Errors (BSSE)

18

3.5

Natural Bond Orbital (NBO)

20

3.6

Quantum Theory of Atoms in Molecules (AIM)

22

3.7

Computational Details of the Present Study

24

Chapter 4 (Results and discussion)

26

4.1

Part Ι: Ng @ X12Y12 Systems

27

4.1.1

Computational Details

27

4.1.2

Binding Energy

27

4.2

Part II: HnYF3-n @ C30X15Y15  Complexes

31

4.2.1

Computational Details

31

4.2.2

Structures of Heterofullerenes

32

4.2.3

HOMO-LUMO Gaps of Heterofullerenes

34

4.2.4

Formation Energy

35

4.3

Pnicogen Bonding Inside the C30X15Y15

37

4.3.1

The Structural Parameters of Endohedral Complexes

37

4.3.2

BSSE Corrected Binding Energies

44

4.3.3

AIM Analysis of Interactions Between Guest and Host Molecules

48

4.3.4

Natural Bond Orbital (NBO) Analysis of the Complexes

51

4.4

Conclusion

56

References

58

 

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